FastQCFastQC Report
Sun 21 May 2023
EGAF00007925648

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925648
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences446304
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22540.5050369255036925No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA12260.27470065247006525No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7450.16692657919265794No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5760.1290600129060013No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA4990.11180719868071987No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)