FastQCFastQC Report
Wed 31 May 2023
EGAF00007925672

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925672
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences491695
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG24990.5082418979245263No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT18140.36892789229095274No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT15920.32377795177905No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG8490.17266801574146576No Hit
TCCAGCGAACGTTTCCAAACTCGTTACCGTA6990.14216129917936932No Hit
GTGGTAGAAATGGAGGGTTACCGTTACGTGG6030.1226370005796276No Hit
GAAGGCGCACTGAACACCCCGAAAGACCACA5950.1210099756963158No Hit
GACGCTAACGGCAACAACCTGACTTTCGAAC5830.11856943837134809No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)