FastQCFastQC Report
Sun 21 May 2023
EGAF00007925694

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925694
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences439101
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG33650.7663384961546432No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT20590.46891261919239535No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC18640.4245037018817994No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG15250.3473005071726095No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA14260.3247544414610762No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA11620.2646315995636539No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT10020.2281935135652162No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG9870.22477744300286265No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG9490.2161233975782337No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC8720.19858756869148556No Hit
CCGGTAGGCGAGGCGGACTATTTCGAATACC7160.16306043484300878No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG6660.151673532968497No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6360.1448413918437899No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG5880.13390996604425862No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC5500.12525592061962965No Hit
GCCGAAGCTGATTATTTCGAATACCACCAGG5450.12411723043217848No Hit
CGCCGTCCGCCACCTGGTCGTCGCCCGTTCT5420.12343401631970775No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC5010.1140967567826081No Hit
CCTCGTCGTCCGCCGCCAGGCCGTCGCCCGT4900.11159163837021552No Hit
GCAGCTCGTGAAGAAGAAGAACCGCACGAAC4800.10931425799531316No Hit
GAAGAGGCTCCGGCAGTTGATCCAGTGCAGG4660.10612592547044986No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA4540.10339306902056701No Hit
TCCCCGCCTCGTCGCCCGCCGCCGGGTCGTC4520.10293759294558655No Hit
CCGGTAGGCGAAGCAGACTACTTCGAGTATC4510.10270985490809631No Hit
CCTGTAGGTGAAGCGGACTACTTCGAGTATC4450.1013434266831549No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)