FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925718

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925718
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences442945
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG36290.8192890765219158No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA14640.33051507523507434No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9610.2169569585388705No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8600.19415503053426497No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT8170.18444727900755173No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7110.1605165426858865No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC7060.15938773436882683No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6800.1535179311201165No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA5690.1284583864813916No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5520.12462043820338868No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC5270.11897639661809029No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA4580.1033988418426667No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)