FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007925722

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925722
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences445877
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG36060.8087432184212238No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA15280.34269540702929285No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10280.23055685760871272No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT8690.19489679889296824No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8560.19198119660803317No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7150.16035812567142957No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6900.15475119820040056No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC6440.1444344516537072No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6050.13568764479890194No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC5920.13277204251396685No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA5410.1213339104730677No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA4690.10518595935650416No Hit

[OK]Adapter Content

Adapter graph