FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925726

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925726
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences455416
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41210.9048869604932632No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT14150.3107049379029283No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13430.2948952166810125No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10250.22506894795088447No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7680.16863702636710173No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7180.15765805329632687No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG6600.14492244453422803No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6580.14448328561139706No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG4940.10847225393925554No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4830.10605687986368506No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG4800.10539814147943857No Hit
CCGACCAGCGGTCCGCTGAACATCCCGCAAC4590.10078697278971314No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)