FastQCFastQC Report
Sun 21 May 2023
EGAF00007925730

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925730
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences482738
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC13980.28959808426102773No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10520.21792359416495077No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA9870.20445873330875133No Hit
CTGGAACGTCCGGTGTACCCGAAACCGGTTC8880.1839507144662322No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8860.18353641105527224No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG8280.17152161213743272No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7960.164892757562073No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7540.1561923859319134No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6500.1346486085619943No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC5730.11869792724003496No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG5300.10979040390439535No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5060.10481876297287555No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)