FastQCFastQC Report
Sun 21 May 2023
EGAF00007925748

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925748
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences487850
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16030.328584605923952No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11810.24208260735881929No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8860.18161320077892795No Hit
GACGCTAACGGCAACAACCTGACTTTCGAAC6110.12524341498411395No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)