FastQCFastQC Report
Wed 31 May 2023
EGAF00007925771

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925771
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences512674
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT11080.21612174598282732No Hit
TTGTGGCACCGGTGGCAGCAGGGTGGCCATGACACGCTGTTCCA8460.16501714539844034No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGGCGG6720.1310774488271299No Hit
GAAGATGTAATCCCAGGACTCATCCAGGTCAGCCGGATCGATAG6180.1205444395463784No Hit
CGGCGGCGGTTCCTGATAACCCTGGTACGGGGCTTGCGGAGCCG5710.11137682035757615No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC5400.10533009280751511No Hit
AGACGGCGGCGGGGTAGGTTTGACCGGAACTGGTTTCGGCACTG5380.10493998135267246No Hit
CGGACGCGTTGGCAGGGTCGCGCCAGTTTCGTTTGCAGTCAGAG5230.1020141454413526No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)