FastQCFastQC Report
Sun 21 May 2023
EGAF00007925776

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925776
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences449543
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT27620.6144017368750042No Hit
ATGTCCAACATGGACATCGATGGTATTAACA11640.258929624084904No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10530.2342378815819621No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7880.1752891269578216No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG7140.15882796528919368No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA6780.15081983258553686No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5540.12323626438405225No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4960.11033427280593847No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)