FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007925778

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925778
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences420772
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG36800.8745829095091879No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT26290.6248039318205584No Hit
ATGTCCAACATGGACATCGATGGTATTAACA11060.26285018965140267No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8650.20557451541452376No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG6430.15281435076478472No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA6230.14806118277832175No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4800.11407603167511148No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4780.11360071487646517No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)