FastQCFastQC Report
Sun 21 May 2023
EGAF00007925794

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925794
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences374605
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG33310.8892032941364904No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA12610.33662124104056274No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7740.20661763724456428No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5790.15456280615581747No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5700.152160275490183No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5050.13480866512726739No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4310.11505452409871732No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA4260.11371978484003151No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG4170.11131725417439704No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG4000.10677914069486526No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)