FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925798

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925798
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences375085
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG34150.9104602956663157No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA12530.3340576136075823No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7480.19942146446805392No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5440.14503379234040284No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5070.13516936161136808No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5020.1338363304317688No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4500.11997280616393617No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG4470.1191729874561766No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG4010.10690910060386313No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA3870.10317661330098511No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)