FastQCFastQC Report
Sun 21 May 2023
EGAF00007925800

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925800
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences393761
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11620.29510286696752597No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC9790.24862797483752833No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC9720.24685024672326614No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC9120.23161257717244726No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC8490.2156130241440874No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7520.19097879170359686No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6080.1544083847816315No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4750.1206315506106496No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA4640.11783797785966613No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA4470.11352063815360078No Hit
GGTGACGTTGCTAAAGCGATCAATGACGCGG4230.10742557033327323No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC4160.10564784221901101No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)