FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925808

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925808
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences418135
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT10650.25470242864146747No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7690.18391189448383893No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7260.17362813445418346No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5980.14301601157520896No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5430.1298623650256496No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5230.12507922082580983No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4250.10164181424659499No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)