FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007925810

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925810
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences421075
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11100.2636109956658553No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8640.20518909932909812No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7640.1814403609808229No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6170.14652971560885827No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5560.13204298521641036No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5340.1268182627797898No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)