FastQCFastQC Report
Wed 31 May 2023
EGAF00007925812

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925812
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences398622
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG36020.9036129466010406No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9920.2488573134448174No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7560.1896533558107681No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6130.15377977131217044No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5090.12768989167682665No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4840.12141828599525366No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4070.10210174049600876No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)