FastQCFastQC Report
Sun 21 May 2023
EGAF00007925824

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925824
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences414818
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG36080.8697790356252622No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT20540.4951569121879957No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9730.2345606989089191No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8260.1991234710162047No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC7340.1769450698860705No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5060.12198120621573799No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG4650.11209735353817818No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)