FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925846

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925846
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences414702
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG34780.838674518087687No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT18080.4359757126804308No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10500.2531938596871971No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG8310.2003848546667245No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7280.17554774271645665No Hit
ATCCAGGGCAAACTGGAATACCGTCACACCT6260.15095176777541464No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC4780.11526349040998113No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4710.11357553134539983No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)