FastQCFastQC Report
Wed 31 May 2023
EGAF00007925866

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925866
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences424502
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT29840.7029413288983326No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14170.333802903166534No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC13730.3234378165473896No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA13270.3126015896273751No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG12380.2916358462386514No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG10870.2560647535229516No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA8890.2094218637368022No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8130.19151853230373472No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG7960.18751383974633806No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC7470.17597090237501825No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC7110.16749037695935473No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG6890.16230783364978257No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG6320.14888033507498197No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA6060.14275551116366944No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5640.1328615648453953No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG5350.12603003048277744No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAAC5190.1222609080758159No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG4890.11519380356276294No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG4790.11283810205841198No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA4500.10600656769579413No Hit
CAGGACAGCCTGCCGGATACCAAAGCATCTG4490.10577099754535903No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA4430.10435757664274843No Hit

[OK]Adapter Content

Adapter graph