FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007925876

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925876
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences441163
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60221.3650283455321501No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT6590.14937789433837378No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6060.13736419418672918No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5920.13419076395799284No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG5800.1314706809047903No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)