FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925922

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925922
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences462055
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG65931.4268864096265594No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC10590.22919349428098387No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG8960.19391630866455292No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7900.17097531679129108No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7210.1560420296285074No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6420.13894449794937833No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5950.12877254872255467No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT4950.1071301035591001No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG4750.10280161452640918No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC4670.10107021891333282No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)