FastQCFastQC Report
Wed 31 May 2023
EGAF00007925924

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925924
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences500225
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG31690.633514918286771No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12410.24808836023789294No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG10680.21350392323454445No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8180.16352641311409866No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7820.15632965165675447No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG7230.14453495926832924No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6060.12114548453196063No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5830.1165475536008796No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG5620.11234944275076215No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC5360.1071517816982358No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)