FastQCFastQC Report
Wed 31 May 2023
EGAF00007925964

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925964
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences452568
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG61391.3564812359689593No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT47651.0528804511145287No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA15180.3354192077212706No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC10530.23267221721376677No Hit
TCTGGCTACGAAATTGACCACATCGACCTGG9010.199086104187658No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7960.17588517084725389No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6680.14760212829895175No Hit
GGTCAGAAAGGTGGCGCGCAGAAGTCCCAGA6570.14517155432995704No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5750.12705273019745097No Hit
ATGGACGAACTGCAGCCGACCATGCAACTGA5610.12395927241873043No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)