FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925978

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925978
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences446423
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60421.3534248907426365No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT41360.9264755624150189No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA19270.43165338703427014No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10160.22758684028376672No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA9680.2168347060971321No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA8820.1975704656794117No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7070.1583699764573062No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6120.1370897108795918No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6100.136641705288482No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6040.13529768851515267No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5810.13014562421739023No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5230.1171534620752067No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)