FastQCFastQC Report
Sun 21 May 2023
EGAF00007925982

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925982
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences451026
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG63461.4070142297783277No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT42460.9414091427101763No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA21450.47558233893389734No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10270.22770305924713874No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA9690.21484349017573268No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA8230.18247285078908976No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7120.15786229618691605No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6280.13923809270419No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6110.13546890866601927No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5590.12393963984337932No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5460.12105732263771934No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5060.11218865431261169No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)