FastQCFastQC Report
Sun 21 May 2023
EGAF00007926009

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926009
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences477515
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT9450.1978995424227511No Hit
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGATCAT7490.15685371140173607No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT5540.11601729788593028No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)