FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926010

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926010
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences477515
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG67201.4072856350062302No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9570.20041255248526227No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7660.16041380899029348No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5700.11936797796927845No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5170.10826885019318766No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT4990.10449933509942096No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)