FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926038

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926038
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences429304
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG61871.4411698935952146No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7160.1667815813502786No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6530.15210666567280995No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5040.11739932541974918No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4840.11274062203007659No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4400.10249147457279689No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4360.10155973389486238No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)