FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007926039

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926039
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences426888
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT10300.24128108543692958No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT5960.13961507468000975No Hit
TTCCGGGTGGATGTGACCGTGATGGTCGTGATCGTGATCATGGT5700.13352448417383483No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC4520.10588257341504095No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)