FastQCFastQC Report
Wed 31 May 2023
EGAF00007926040

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926040
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences426888
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG59501.3938082119900304No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10350.24245235284196323No Hit
CGTGGCGAACAGCAGTGGCTGGCAGGCAACC6680.15648132531249415No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6230.1459399186671914No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6130.14359738385712412No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)