FastQCFastQC Report
Wed 31 May 2023
EGAF00007926042

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926042
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences470703
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG29150.6192864715117601No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11580.24601500309112115No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7560.1606108310335817No Hit
CGTGGCGAACAGCAGTGGCTGGCAGGCAACC7180.15253779984406304No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6500.1380913229786086No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)