FastQCFastQC Report
Wed 31 May 2023
EGAF00007926046

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926046
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences453156
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG64111.4147445912665837No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT18970.4186196365048681No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG15620.3446936595785999No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG13910.30695831016250474No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC13690.30210346988674985No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA13680.30188279532876094No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG11680.2577478837309889No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG8900.1964003566100857No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG8860.19551765837813026No Hit
GTTGCGACCCCACACGCCTCCGCGCGCGCTC8540.18845607252248672No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8390.18514595415265384No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG8060.17786369373902144No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7680.16947806053544476No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7550.16660929128158958No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7050.15557556338214654No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6410.1414523916708595No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC6340.13990766976493746No Hit
CCGGTAGGCGAGGCGGACTATTTCGAATACC6090.13439080581521595No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6050.1335081075832605No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG5950.13130136200337192No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG5260.11607481750214055No Hit
ATTGCTGCCGTTGGCTCTCCAGTGAAGTCTA4660.10283434402280892No Hit
AGCCCGGCTAAATCTGCGCCGCCGTCTCCGG4540.1001862493269426No Hit

[OK]Adapter Content

Adapter graph