FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926060

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926060
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences499946
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC21680.4336468338580567No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG16260.3252351253935425No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG14440.2888311937689271No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT14090.28183043768727023No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA13220.26442855828429473No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12010.2402259444019954No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG11630.23262512351333942No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC11270.22542434582934956No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG10060.2012217319470503No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8780.17561896684841963No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG8700.1740187940297552No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG8280.16561788673176703No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC8070.16141743308277295No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG7820.15641689302444664No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC6510.13021406311881684No Hit
GCACCAACCTGCAACATCAAAGTAACCGTTT6170.12341332863949307No Hit
GACGCCGCGTCCAGCAGCTCTGCAGGTCAGT5970.11941289659283202No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC5680.11361227012517351No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG5680.11361227012517351No Hit
CCTCGTCGTCCGCCGCCAGGCCGTCGCCCGT5460.10921179487384637No Hit
GCACCGACCTGCAACATCCGTGTGACCGTTT5160.1032111468038548No Hit

[OK]Adapter Content

Adapter graph