FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926081

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926081
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences441915
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAACTGAGCCTTCACTGGTTCAGCTCCCTCGGTCGAGTACGCT7100.1606643811592727No Hit
GGCGCCCGCGGTTCAACCAATGGTAACACAAGAACTGAGCCTTC5080.11495423328015568No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT4760.10771302173494904No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)