FastQCFastQC Report
Wed 31 May 2023
EGAF00007926086

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926086
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences447276
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43530.9732245861615647No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA13850.30965220579686814No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7540.16857600228941413No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5930.1325803307130273No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5500.12296657991933393No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4730.10575125873062718No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)