FastQCFastQC Report
Sun 21 May 2023
EGAF00007926135

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926135
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences405752
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT10810.2664188962716142No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT6680.16463258344998916No Hit
GGTAGAAGCGGCGCGGGAGCTACCAGACAGGCGACCCGGTGCGG5560.13702951556615864No Hit
CAGCGGATGAACACGGGATTTAGCGGTCCACAGTTCTTCAGGTT5090.12544608529347975No Hit
TTTCAGGGACGGTACGCCGACACGAGAACCGCGACCTTTAACTG4510.11115163942506752No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)