FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926142

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926142
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences422848
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10370.2452417890116543No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8330.1969975026487059No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG7560.1787876494626911No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6830.16152376267594976No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6240.14757075828666566No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)