FastQCFastQC Report
Wed 31 May 2023
EGAF00007926144

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926144
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences425286
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11230.2640575988863964No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7860.18481680563197472No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG7290.17141406018538113No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6850.16106808124415098No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6740.15848158650884345No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)