FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926148

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926148
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences402757
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9470.23512937081168048No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA7220.17926441998525167No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5980.14847662486313087No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5810.14425571746735624No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)