FastQCFastQC Report
Wed 31 May 2023
EGAF00007926157

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926157
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences392291
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA7810.19908690232505974No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA6570.16747771424784152No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT5730.14606503845359695No Hit
TTTCAGGGACGGTACGCCGACACGAGAACCGCGACCTTTAACTG4320.11012233265611499No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)