FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926160

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926160
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences415882
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17660.42463968144810305No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11630.2796466305346228No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6150.14787848476250476No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG4730.11373418421571503No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG4450.1070015052346579No Hit
GTTGCGACCCCACACGCCTCCGCGCGCGCTC4190.10074973189510485No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)