FastQCFastQC Report
Sun 21 May 2023
EGAF00007926162

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926162
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences398268
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42541.0681249811684594No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17780.4464330551287073No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5860.1471371036588428No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG4250.10671206323380238No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG4110.1031968423272771No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)