FastQCFastQC Report
Sun 21 May 2023
EGAF00007926176

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926176
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences419358
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT45181.0773611091239466No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41900.9991463141277859No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA19180.4573657829348671No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9740.23225978758006285No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC9660.23035210965332725No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA9540.22749059276322378No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG9300.22176755898301687No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG9110.21723682390701976No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA8950.21342146805354853No Hit
ATTGCTGCCGTTGGCTCTCCAGTGAAGTCTA8550.20388307841987036No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG6170.14712966009948542No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC5920.14116816657843656No Hit
TCTACTGCCAAGAGCTCCGTATCCAACGCGC5900.14069124709675265No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5600.13353745487149404No Hit
ATGGCATCCACCACCCCGATCACCATGGAAG5010.11946833016181879No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA4680.11159915871403431No Hit
ACCCAGAACCCAGTGGAAAACTACATCGACT4230.1008684703761464No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)