FastQCFastQC Report
Sun 21 May 2023
EGAF00007926177

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926177
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences393278
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCGCACCGTGGTTGATCGGCTGGGTCAGCGGCAGGTCGAAGT15570.39590315247738245No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA12500.3178413234404162No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA10250.2606298852211413No Hit
ATCGCCCGGAACTACCTGGCTAGTGTGACCGGTCTCGGCAGCGG7970.20265562782560936No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT7720.19629880135680106No Hit
GACCGGCCATTCCGGGGTGCGCGGACGTGGACGACCGTGAATAG6510.16553176124776875No Hit
CATGGTGTCGCCCGGCACTACCTGGGAAGTGTGGCCGGTCTCAG5930.15078392384013345No Hit
GAAGATGTAATCCCAGGACTCATCCAGGTCAGCCGGATCGATAG5840.14849546631136246No Hit
CTGAACAACATCGGTACCCTGAGAAGGCGGTGCGCCCTGAAACA5640.1434100051363158No Hit
GTCACCCGGAACGACCTGGCTGGTGTGGCCAGTTTCTGCTGCGG5630.14315573207756346No Hit
TTGTGGCACCGGTGGCAGCAGGGTGGCCATGACACGCTGTTCCA5450.13857881702002145No Hit
GGCATCGGTGAAGCCAGTGCCGAATGCGTCACCCAGACCTTTGA5150.13095062525745146No Hit
CATGGTGTCACCCGGGACAACCTGGCTGGTGTGACCAGTCTCAG5010.1273908024349188No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT4920.1251023449061478No Hit
TGGTGCCTGAGACTCGTTCAGTTTCTTAGCTTCGCCCAGGACGT4480.11391433032104516No Hit
CGCCTGCGGGCACGGACGACCGTGAATGGACAGATCCAGTGCTT4360.11086305361601716No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC4130.10501477326471352No Hit
ACGAACAATCACCTTAATTGCTTTGCCGTTAACTTTAACTACGT3980.10120067738342853No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)