FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926184

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926184
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences432568
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17000.3930017939376006No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA16290.37658818960255963No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10700.24735995265484273No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9680.2237798450185867No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8530.19719442954633723No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG8240.19049028129681345No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7560.17477020953930944No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7440.17199607922916166No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6780.1567383625233489No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4920.11373934271605851No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC4620.1068040169406891No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)