FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007926210

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926210
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences412597
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11330.2746020935683003No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9080.22006946245367756No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7810.18928882178009052No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5480.13281725267028116No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5470.13257488542088286No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4910.11900231945457675No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4540.11003473122683878No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4240.10276371374488909No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4130.10009767400150753No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)