FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007926212

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926212
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences396482
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG39741.0023153636230648No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7870.19849577029978663No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7010.17680499997477817No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4700.1185425820087671No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4510.11375043507649779No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4240.1069405420674835No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4230.10668832380789041No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4200.10593166902911104No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4200.10593166902911104No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4090.10315726817358668No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)