FastQCFastQC Report
Wed 31 May 2023
EGAF00007926266

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926266
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences506152
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT44300.8752311558583192No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10220.20191563008740454No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC10150.20053264631968265No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG8680.17148998719752168No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8420.166353190345983No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG8010.15825285684932588No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7210.14244732807536076No Hit

[OK]Adapter Content

Adapter graph