FastQCFastQC Report
Sun 21 May 2023
EGAF00007926268

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926268
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences479792
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT43620.9091439623836995No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42340.8824657351518992No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC8550.17820222096241706No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG8400.17507586620869042No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7370.153608230233101No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7080.14756394437589623No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6290.1310984760062694No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)